How to Create a Goodness of Fit Plot from a Dimension Reduction Output

This article describes how to go from a dimension reduction output, such as a Principal Component Analysis, Multidimensional Scaling or t-SNE output:

To a Goodness of Fit Shepard Diagram plot:

Requirements

A dimension reduction output created in Displayr such as a Principal Component Analysis, Multidimensional Scaling or t-SNE.

Please note these steps require a Displayr license.

1. Select your dimension reduction output.

2. Click the Visualization button on your output > Dimension Reduction > Goodness of Fit Plot.